BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036E09LP1|AL430248
(920 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1260 1781 0.0
>3x_Contig1260
Length = 5981
Score = 1781 bits (895), Expect = 0.0
Identities = 913/921 (99%), Gaps = 1/921 (0%)
Strand = Plus / Plus
Query: 1 gatgagaacgtctcattagagttctacgaagaattccatcaactcatcaacttatactgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3449 gatgagaacgtctcattagagttctacgaagaattccatcaactcatcaacttatactgc 3508
Query: 61 tggctccatatcagatacccgaacctatttgtagactacgaatcggccatcgacataaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3509 tggctccatatcagatacccgaacctatttgtagactacgaatcggccatcgacataaag 3568
Query: 121 aaccattgtgagatgatgatcttcaagaagctcgaattcctaaagaagaacccctacaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3569 aaccattgtgagatgatgatcttcaagaagctcgaattcctaaagaagaacccctacaag 3628
Query: 181 aagttcaataaaagatcacaatctaagaactcttctccgaaaaaccgatatgctactaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3629 aagttcaataaaagatcacaatctaagaactcttctccgaaaaaccgatatgctactaag 3688
Query: 241 aaatcttatagatccaattcttattgaaattgcattgtgtcagtttctcgtttatacatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3689 aaatcttatagatccaattcttattgaaattgcattgtgtcagtttctcgtttatacatg 3748
Query: 301 tatattaggaaatcttgtwaatacttcataaaacacaatttcatcctccgatgagacact 360
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 3749 tatattaggaaatcttgtaaatacttcataaaacacaatttcatcctccgatgagacact 3808
Query: 361 gttaagcgaataacacccatctagtaccataattcgttctaataacccggttagaaagtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3809 gttaagcgaataacacccatctagtaccataattcgttctaataacccggttagaaagtc 3868
Query: 421 ttcagcacacatgttgcatctcaaactctcatctcatctcatcgctcgttcaagatttgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3869 ttcagcacacatgttgcatctcaaactctcatctcatctcatcgctcgttcaagatttgg 3928
Query: 481 agagaaaggcttccaaatctgaaaaavattcgtttagagtataaraggtgatggatctct 540
|||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 3929 agagaaaggcttccaaatctgaaaaaaattcgtttagagtataaaaggtgatggatctct 3988
Query: 541 acaccaaaaggaaataaatgccaacttgaaacgttccaaattagtagtgactgagccaca 600
||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 3989 acaccaaaaggaaataaatgcaaacttgaaacgttccaaattagtagtgactgagcaaca 4048
Query: 601 cgcaggcgccgttatactctattgtattatwataaattaacctaacgatgtctgataacg 660
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 4049 cgcaggcgccgttatactctattgtattataataaattaacctaacgatgtctgataacg 4108
Query: 661 tatacattgttgctgctgcaagaactccaattggttctttccaaggttctttgtcctcta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4109 tatacattgttgctgctgcaagaactccaattggttctttccaaggttctttgtcctcta 4168
Query: 721 agaactgtgtcgatctaggttctgctgctgtcaaaggtgctttagctcaagttccagaga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4169 agaactgtgtcgatctaggttctgctgctgtcaaaggtgctttagctcaagttccagaga 4228
Query: 781 tcgatccaagcactgtcgaggaaatcatcttcggtaacgttatatctgctaatgttggtc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4229 tcgatccaagcactgtcgaggaaatcatcttcggtaacgttatatctgctaatgttggtc 4288
Query: 841 aagcaccagctagacaagtggcattagctgctgggttggg-aaacacattgtcgccagtw 899
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 4289 aagcaccagctagacaagtggcattagctgctgggttgggaaaacacattgtcgccagta 4348
Query: 900 ctgttaacaaggtttgtgctt 920
|||||||||||||||||||||
Sbjct: 4349 ctgttaacaaggtttgtgctt 4369
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7130
Number of Sequences: 1807
Number of extensions: 7130
Number of successful extensions: 322
Number of sequences better than 1.0e-20: 1
length of query: 920
length of database: 10,358,551
effective HSP length: 16
effective length of query: 904
effective length of database: 10,329,639
effective search space: 9337993656
effective search space used: 9337993656
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)